You cannot process the zero payrolls without the active employees. Please note that to submit the No Payment Information, you need to submit the EPS with "No Payment for the period”.
Location: Payroll module > Client specific > Submissions > FPS & EPS
Click here to watch how to submit nil payroll for nil employees
Please enter your client, and click submissions, FPS & EPS
You will enter this page, click 'add submission'
Please check the box 'no payment for period'